Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015904997.1_cds_XP_016455145.1_49100
CDS Infomation

[gene=LOC107779265] [db_xref=GeneID:107779265] [protein=protein JASON-like] [partial=3'] [protein_id=XP_016455145.1] [location=complement(join(<2005..2087,2213..3050,3259..3503,5077..5174,5299..5353,5771..5968))] [gbkey=CDS]
Sequence

ATGTTATGGTCAAGGTTACCTTCCGAAGAAGAACTTAATTATCCGAAAAATCGCGATATC
GTTGGAGTGTTTAGGGCACTGGTTGTCGCCGCCATGGGATGTTTATTCGGTTGTTTTCGT
ATCAAGGATGGTTCTCTTTCTCCTGCTCCTTGCTCCGATCCTAAATCTCACCTCGTCTCC
CAGTCTACATCTACTAAGGAACCTGTCGTGTCTCGCAACAGGAGTCCATTATCTTCACTA
TTTATTTCTGAAGAAAAAGGCGAGGATAATGATTTGCACCAAACAGAAATGGATAAGCAA
GAAACAGGAACACCTAAGTCTGAGTTGGATGCGAAAGAGCTCAGGGATCAGGCCAAGTTT
CTTAAAGCTTGTGGAACCTTACCTGAGACTCCTGCTGAACTTCGAAAAGGCTTGGTGAAA
CGCAAAGATCTATCAACTTCAACAGGAGATGTTGAACCTTTAAAATTCAAGTCTTGGCTC
TCTGATATGGCTGTTCAAGAGCTCAACCTGAATTTGCCACCTGAGGACCCTATTACACCT
AGTAAAAGCAATGGACTGGAAAAACATTATGGTTCCTTGGCACGTTCACCAAGCAGCTGC
ATGATGGATGGACACAGTAGTCAAAATTTGTCGAAAAGCTCTATTCATGGTAATGGGTCT
TCTAACACTCCGGCATCCATTGAGGTTAATGCTAATCAGACTCATAAATACACAGCTTCA
GAAATTACACCAACATTTGCTCCCAGTGCCCAATACATGAACAAATCTGTTCGTTTTGAC
TGTGAGTCCGATCTATCTGCAGTATCATGCAAAAGTTCTTCATCGACACTTGACAGTCAA
AACTCAAAGCAGCCAGGCAATTCCTATGCATTGAAGAATTCTCCCTATCCAACCCCCCTA
AAACTAAGTGATGAAATGCAAACACCTGGAACTGTTTTTCCAGCATATTTAGACAATATT
GCAAATGGAAAAACTGCACGGATCAGGTCTCAGTTTGTTTATCCAGTGTTAAACCCTGTT
TATGGCGCATCACAGTTGAAGGAATTGTCAGATGAAGATTCCTACTCCATTCTAGACTCT
AATTCCATATTATTGTCTAGTAACATGACAGAATCTGGTGACTGTCCAAATGAAGCAAGC
TTTTCGTCAGAACAAGGAATGTCTGGATTAAAAGAAGCTACAGCTGATAAAGATTTCAAG
GTAGAAGCAAGCTTGTCTTCGTGGCTGAAACCATCTTCAATCAATCAAGATGAGGGTAAG
CAGCATAATGGTTCAGTTTATGGTGACAATGTTCATTATGGCAGAACTCCTGGAGATAGG
CCTATTCTTGGGTTAGTTGCTGCTCACTGGAAAGATGATGAAAATTCTCATATATCTCCC
AAAAAATGGTGGGATGGAAACGGGATTCCTAATTCAACAAACAAGTATAAGGAGGATCAG
AAAGTAAGTTGGCATGCAACGCCATTTGAAGAGAGACTGGAGAAGGCATTATCACAAGAA
ACTTCCATTTCACAAAG

Peptide Sequence

PEP ID

XP_016455145.1
PEP Infomation

PREDICTED: protein JASON-like, partial [Nicotiana tabacum]
Sequence

MLWSRLPSEEELNYPKNRDIVGVFRALVVAAMGCLFGCFRIKDGSLSPAPCSDPKSHLVS
QSTSTKEPVVSRNRSPLSSLFISEEKGEDNDLHQTEMDKQETGTPKSELDAKELRDQAKF
LKACGTLPETPAELRKGLVKRKDLSTSTGDVEPLKFKSWLSDMAVQELNLNLPPEDPITP
SKSNGLEKHYGSLARSPSSCMMDGHSSQNLSKSSIHGNGSSNTPASIEVNANQTHKYTAS
EITPTFAPSAQYMNKSVRFDCESDLSAVSCKSSSSTLDSQNSKQPGNSYALKNSPYPTPL
KLSDEMQTPGTVFPAYLDNIANGKTARIRSQFVYPVLNPVYGASQLKELSDEDSYSILDS
NSILLSSNMTESGDCPNEASFSSEQGMSGLKEATADKDFKVEASLSSWLKPSSINQDEGK
QHNGSVYGDNVHYGRTPGDRPILGLVAAHWKDDENSHISPKKWWDGNGIPNSTNKYKEDQ
KVSWHATPFEERLEKALSQETSISQ

Transcript Sequence

Gene sequence data has not been registered.